Microsoft Dynamics GP vs. Paychex Flex

Overview
ProductRatingMost Used ByProduct SummaryStarting Price
Microsoft Dynamics GP
Score 7.4 out of 10
N/A
Microsoft Dynamics GP is an ERP software with accounting capabilities. It includes various packs for customizability and features tailored to specific industries’ needs. GP is offered as a perpetual license or subscription.N/A
Paychex Flex
Score 6.7 out of 10
N/A
Paychex Flex, of Paychex' Online Payroll Services, is a cloud-based human resource management and payroll platform. Paychex offers core and specialized services, and scales to meet the needs of small businesses, SMBs, and large enterprises.
$59
per month/+$4 per employee
Pricing
Microsoft Dynamics GPPaychex Flex
Editions & Modules
No answers on this topic
Paychex Go
$59
per month/+$4 per employee
Paychex Flex Service
Contact sales team
Paychex Flex Enterprise
Contact sales team
Offerings
Pricing Offerings
Microsoft Dynamics GPPaychex Flex
Free Trial
NoNo
Free/Freemium Version
NoNo
Premium Consulting/Integration Services
NoNo
Entry-level Setup FeeNo setup feeRequired
Additional Details
More Pricing Information
Community Pulse
Microsoft Dynamics GPPaychex Flex
Considered Both Products
Microsoft Dynamics GP

No answer on this topic

Paychex Flex
Chose Paychex Flex
We chose Paychex Flex because it is integrated with the company that handles the retirement accounts for our employees. Also, as previously mentioned, they handle payroll tax remittance.
Chose Paychex Flex
There's no comparison between the ADP and Paychex. ADP made errors in tax filings, W-2s, 1099s. I didn't have a designated rep to help me through tough issues so I had to work through things on my own. I pay for this service to help me save time and get the job done correctly …
Top Pros
Top Cons
Features
Microsoft Dynamics GPPaychex Flex
Payroll Management
Comparison of Payroll Management features of Product A and Product B
Microsoft Dynamics GP
6.6
17 Ratings
12% below category average
Paychex Flex
8.5
288 Ratings
6% above category average
Pay calculation6.116 Ratings9.0271 Ratings
Benefit plan administration7.012 Ratings7.2156 Ratings
Direct deposit files7.016 Ratings9.2270 Ratings
Salary revision and increment management7.015 Ratings8.5193 Ratings
Reimbursement management6.014 Ratings7.9105 Ratings
Off-cycle/On-Demand payment00 Ratings9.1136 Ratings
Customization
Comparison of Customization features of Product A and Product B
Microsoft Dynamics GP
7.0
25 Ratings
1% below category average
Paychex Flex
-
Ratings
API for custom integration7.024 Ratings00 Ratings
Plug-ins7.019 Ratings00 Ratings
Security
Comparison of Security features of Product A and Product B
Microsoft Dynamics GP
6.6
36 Ratings
19% below category average
Paychex Flex
-
Ratings
Single sign-on capability6.129 Ratings00 Ratings
Role-based user permissions7.136 Ratings00 Ratings
Reporting & Analytics
Comparison of Reporting & Analytics features of Product A and Product B
Microsoft Dynamics GP
6.7
37 Ratings
12% below category average
Paychex Flex
-
Ratings
Dashboards7.025 Ratings00 Ratings
Standard reports7.035 Ratings00 Ratings
Custom reports6.035 Ratings00 Ratings
General Ledger and Configurable Accounting
Comparison of General Ledger and Configurable Accounting features of Product A and Product B
Microsoft Dynamics GP
6.7
44 Ratings
10% below category average
Paychex Flex
-
Ratings
Accounts payable6.041 Ratings00 Ratings
Accounts receivable7.032 Ratings00 Ratings
Cash management6.032 Ratings00 Ratings
Bank reconciliation6.037 Ratings00 Ratings
Expense management7.027 Ratings00 Ratings
Time tracking7.013 Ratings00 Ratings
Fixed asset management6.025 Ratings00 Ratings
Multi-currency support8.017 Ratings00 Ratings
Multi-division support7.025 Ratings00 Ratings
Regulations compliance6.111 Ratings00 Ratings
Electronic tax filing7.011 Ratings00 Ratings
Self-service portal7.012 Ratings00 Ratings
Global Financial Support6.07 Ratings00 Ratings
Primary and Secondary Ledgers7.018 Ratings00 Ratings
Intercompany Accounting6.016 Ratings00 Ratings
Localizations8.011 Ratings00 Ratings
Journals and Reconciliations7.022 Ratings00 Ratings
Enterprise Accounting6.114 Ratings00 Ratings
Configurable Accounting7.014 Ratings00 Ratings
Centralized Rules Framework6.012 Ratings00 Ratings
Standardized Processes7.015 Ratings00 Ratings
Inventory Management
Comparison of Inventory Management features of Product A and Product B
Microsoft Dynamics GP
6.8
24 Ratings
3% below category average
Paychex Flex
-
Ratings
Inventory tracking7.022 Ratings00 Ratings
Automatic reordering6.012 Ratings00 Ratings
Location management8.017 Ratings00 Ratings
Manufacturing module6.013 Ratings00 Ratings
Order Management
Comparison of Order Management features of Product A and Product B
Microsoft Dynamics GP
6.7
22 Ratings
10% below category average
Paychex Flex
-
Ratings
Pricing6.016 Ratings00 Ratings
Order entry7.019 Ratings00 Ratings
Credit card processing7.011 Ratings00 Ratings
Cost of goods sold6.022 Ratings00 Ratings
Order Orchestration8.07 Ratings00 Ratings
End-to-end order visibility7.09 Ratings00 Ratings
Order exception Resolution6.05 Ratings00 Ratings
Human Resource Management
Comparison of Human Resource Management features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
6.7
247 Ratings
16% below category average
Employee demographic data00 Ratings8.0197 Ratings
Employment history00 Ratings8.1220 Ratings
Job profiles and administration00 Ratings6.8155 Ratings
Workflow for transfers, promotions, pay raises, etc.00 Ratings7.3154 Ratings
Organizational charting00 Ratings1.01 Ratings
Organization and location management00 Ratings7.9138 Ratings
Compliance data (COBRA, OSHA, etc.)00 Ratings7.5132 Ratings
Leave and Attendance Management
Comparison of Leave and Attendance Management features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
7.0
144 Ratings
14% below category average
Approval workflow00 Ratings6.3102 Ratings
Balance details00 Ratings7.5136 Ratings
Annual carry-forward and encashment00 Ratings7.3110 Ratings
Employee Self Service
Comparison of Employee Self Service features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
8.5
249 Ratings
5% above category average
View and generate pay and benefit information00 Ratings8.6228 Ratings
Update personal information00 Ratings9.0239 Ratings
View company policy documentation00 Ratings7.7111 Ratings
View job history00 Ratings8.7168 Ratings
Asset Management
Comparison of Asset Management features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
7.8
40 Ratings
1% above category average
Tracking of all physical assets00 Ratings7.840 Ratings
HR Reporting
Comparison of HR Reporting features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
6.1
164 Ratings
22% below category average
Report builder00 Ratings5.8134 Ratings
Pre-built reports00 Ratings6.8154 Ratings
Ability to combine HR data with external data00 Ratings5.783 Ratings
Onboarding
Comparison of Onboarding features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
8.0
158 Ratings
0% below category average
New hire portal00 Ratings8.1151 Ratings
Manager tracking tools00 Ratings7.9100 Ratings
Recruiting / ATS
Comparison of Recruiting / ATS features of Product A and Product B
Microsoft Dynamics GP
-
Ratings
Paychex Flex
8.5
59 Ratings
9% above category average
Job Requisition Management00 Ratings9.732 Ratings
Company Website Posting00 Ratings9.730 Ratings
Publish to Social Media00 Ratings6.823 Ratings
Job Search Site Posting00 Ratings6.730 Ratings
Duplicate Candidate Prevention00 Ratings6.828 Ratings
Applicant Tracking00 Ratings9.633 Ratings
Notifications and Alerts00 Ratings9.853 Ratings
Best Alternatives
Microsoft Dynamics GPPaychex Flex
Small Businesses
QuickBooks Self-Employed
QuickBooks Self-Employed
Score 9.1 out of 10
Patriot Software
Patriot Software
Score 9.0 out of 10
Medium-sized Companies
Accounting Seed
Accounting Seed
Score 8.3 out of 10
Paypro Workforce Management
Paypro Workforce Management
Score 9.5 out of 10
Enterprises
Oracle Fusion Cloud ERP
Oracle Fusion Cloud ERP
Score 8.1 out of 10
Infor Human Resources
Infor Human Resources
Score 7.3 out of 10
All AlternativesView all alternativesView all alternatives
User Ratings
Microsoft Dynamics GPPaychex Flex
Likelihood to Recommend
7.0
(50 ratings)
7.7
(298 ratings)
Likelihood to Renew
9.9
(7 ratings)
8.9
(42 ratings)
Usability
8.0
(6 ratings)
8.0
(240 ratings)
Availability
10.0
(2 ratings)
9.3
(10 ratings)
Performance
7.0
(1 ratings)
9.1
(10 ratings)
Support Rating
7.0
(5 ratings)
7.7
(245 ratings)
In-Person Training
-
(0 ratings)
4.5
(1 ratings)
Online Training
-
(0 ratings)
7.0
(4 ratings)
Implementation Rating
8.2
(3 ratings)
9.4
(11 ratings)
Configurability
-
(0 ratings)
7.6
(8 ratings)
Ease of integration
-
(0 ratings)
9.1
(3 ratings)
Product Scalability
9.1
(1 ratings)
9.3
(10 ratings)
Vendor post-sale
-
(0 ratings)
8.9
(31 ratings)
Vendor pre-sale
-
(0 ratings)
9.2
(32 ratings)
User Testimonials
Microsoft Dynamics GPPaychex Flex
Likelihood to Recommend
Microsoft
A large company where users have one function- for instance, where someone only receives or works in payables. That minimizes the number of windows they need. A smaller company where one user does multiple functions will require a lot more training and user knowledge to navigate, and it makes it harder to secure users. You also have to understand that GP started life as Great Plains, designed for accountants. The other modules were added on after Microsoft bought Great Plains, which means that modules like Manufacturing are red-headed step children with much smaller support ecosystems. So, if you're starting fresh, you may want to look at something built for the mobile world. D365 and Business Central are a lot more money, buggy, and hard to customize and essentially still vaporware. Microsoft is heavily investing there, leading to the previously mentioned question about the future of GP. If I was starting today I would be hard pressed to justify jumping into GP in a world where Salesforce ties in with so many programs. GP has MRP but it is limited so it's hard to justify a manufacturer starting with GP today.
Read full review
Paychex, Inc.
In my experience, Paychex Flex is well suited for small to medium sized businesses. It has been helpful in streamlining the onboarding process and it is easy to update and maintain employee profiles and records. It has worked will in a non-profit environment where there is clergy pay and housing, which can get quite complicated. I cannot think of a scenario where it would be less appropriate.
Read full review
Pros
Microsoft
  • User friendly interface
  • Able to be extended into multiple areas of your business
  • One feature we have been using for a few years is EFT for payables - it has significantly reduced the time spent paying vendors and reduced our check printing and mailing costs. It is very easy to setup and use.
Read full review
Paychex, Inc.
  • I like I can enter payroll and if I need to leave the program, I can resume at a later time and my information is saved.
  • I like the analytics & reports features.
  • I like how all my employees have easy access to their portal.
Read full review
Cons
Microsoft
  • With respect to the allocations, once the expense is entered into the allocation account, you lose the ability to run any detail on just the total of the expense. It would be nice if you could run a trial balance on the allocation accounts the same way you can with regular accounts.
  • I've always thought security set up could be a bit simpler. It actually has gotten better through the years. Specifically, with eight separate entities, it would be nice to have a "master" setup where you could call up one group entity, assign the users rights, and then be finished. Currently, whenever I have a new user, I have to call up each individual entity and select all of the features I want the user to have. That means I have to do eight steps for each user.
Read full review
Paychex, Inc.
  • Reporting writing is difficult to figure out
  • Employee turnover inside Paychex was a problem, until we were assigned to Neil Williams - since that time it has settled down
  • Pressure to convert personal connection with payroll advisor to using automated service
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Likelihood to Renew
Microsoft
Due the economic challenges that Puerto Rico is having, the company has had to merge some companies in order to be more efficient. It has been easy in GP to process those merges, even thought we had to spend days to accomplish that the process was smooth and accurate. In addition we were able to streamline the purchasing and sales process and the organization is confident to keep renewing GP for the future versions.
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Paychex, Inc.
Overall I like the features that Paychex Flex offers. I am sure that there are other features that I am unaware of, so I am excited to see if there is more that Flex is capable of to make my job easier. The basic features are really user friendly and easy to access. If there ever is an issue customer service is great
Read full review
Usability
Microsoft
Though it is a basic accounting package, I believe some users do not find the old style menus and navigation options intuitive. There is also a great lack of training resources in the market, so users have to learn the product without guidance a lot, resulting in inefficient workflows and misuse or misunderstanding of many features.
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Paychex, Inc.
Some things could be streamlined. For example, we could do custom options for the "add items" tab which has so many options that we never use. "Medical Pay" could be something that the system remembers for the applicable employees. Salaried employees' salaries should definitely be auto-filled. Overall the system works well but I think it could be improved to be easier to use and read.
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Reliability and Availability
Microsoft
No answers on this topic
Paychex, Inc.
We have not experienced any difficulties with unplanned outages. Notifications are always made for outages, and they do not effect normal business operations.
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Performance
Microsoft
No answers on this topic
Paychex, Inc.
Unless there is lag time within the internet, the Paychex Flex website loads exceptional fast, pages load quickly and reports that I need to print or download load quickly. If I need to create a specialized report, once I complete it I receive an e-mail telling me my report is ready to be downloaded. Changing between web pages is fast as well.
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Support Rating
Microsoft
The rating is directed to the thrid party serive provider that we use. I do not now how good the Microsoft direct support is.
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Paychex, Inc.
Our dedicated representative is one of the main reasons we are sticking with Paychex Flex. If it were not for this person, other platforms could provide the same/similar functionality. It is the ability to speak with someone that understands our business and is willing to get questions answered in a timely fashion that keeps us with Paychex Flex.
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In-Person Training
Microsoft
No answers on this topic
Paychex, Inc.
We did online training only
Read full review
Online Training
Microsoft
No answers on this topic
Paychex, Inc.
It was easy to understand and follow along. I do like the informational videos that we can utilize before we opt to call in for customer service support. It has made a difference since sometimes that resolves the issue I may have had and saved myself a phone call to Paychex support.
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Implementation Rating
Microsoft
Basically the challenge with this implementation was the Business Portal, too many errors and even the aplication is up and running the users are still having issues. We will start planning the migraton to GP 2015 soon.
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Paychex, Inc.
Implementation was very smooth. The most cumbersome task was entering the current employees into the system during initial set up, but Paychex staff handled most of that and verified against prior system reports as well as internal reports provided to ensure 100% accuracy.
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Alternatives Considered
Microsoft
I come from a strong background of using SAP. SAP doesn't have the flexibility of GP, an example would be SAP doesn't allow core mods, if they catch you, you lose support. Microsoft doesn't really care about mods, but they will be quick to have the vendor you used support your issue if it is caused by those mods. With SAP your company adapts to the software, where with GP you adapt the software to you.
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Paychex, Inc.
We still use QB Desktop Pro to maintain a Check Register / Overall Balance for the company, but once having tried QB Payroll Online for about 3 months prior to finding Paychex Flex I can tell you that there's just no comparison. QB online is VERY EXPENSIVE and not so user-friendly. I hated every minute of those 6 payrolls we ran through QB online.
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Scalability
Microsoft
The functionality that GP and related ISV solutions offer and the ease of integration of GP to other systems makes it an extremely scalable solution
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Paychex, Inc.
Employees can log in at home and get up to date information on their FSA balance and any medical bill reimbursements they may have uploaded. At renewal time they have the ability to make changes to their FSA or for new employees star the enrollment.
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Return on Investment
Microsoft
  • Microsoft Dynamics GP allows my clients to move from a paper or spreadsheet based company to an integrated, electronic, streamlined business. I love being able to help clients gain efficiencies through the use of Microsoft Dynamics GP.
  • Microsoft Dynamics GP allows for better customer service because everything is at our fingertips. If someone calls questioning an invoice, we can easily look it up. If someone calls stating they paid an invoice with a certain check number, we can quickly run a query to find that particular check number to see where it was applied.
  • Having everything on a single platform provides ease of use for upgrades, backups and end user training. There is only one software to learn!
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Paychex, Inc.
  • I do not believe we have saved anything additionally. The time we've had to spend to get things to hopefully work is sad. This is the reason we've had to turn off all extra "products" of Paychex Flex. Time and Attendance is horrible. Benefits management is horrible. The user experience is horrible.
  • One thing I do not understand is why are updates for states, cities, counties, school districts, etc. not automatically updated? Should we not get a big red flag if we have an employee living/working, being paid in CA, but they aren't set up for CA sick time? If it is required to be on the paycheck stub to show the balance of the sick time, why would we not be notified that we are out of compliance?
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ScreenShots

Paychex Flex Screenshots

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